Allele Frequencies
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A Report with allele frequencies sorted by SNP can be generated here. The Report is sent to the User Results section.

Time: 18 : 42 : 59
Date: 16 / 08 / 2005
User: advanced

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Study: sample 1                        
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SNP Code                         Total      Alleles   
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rs1342476                        22                      C: 0.5000                 T: 0.5000                
rs1886340                        22                      C: 0.6818                 T: 0.3182                
rs1998626                        16                      C: 0.3750    G: 0.6250                             
rs2104604                        24                                   G: 1.0000                             
rs242051                         20                      C: 0.9000    G: 0.1000                             
rs272814                         22                                   G: 0.9545    T: 0.0455                
rs274133                         22                      C: 0.2273                 T: 0.7727                
rs274735                         18         A: 0.8889                 G: 0.1111                             
rs414909                         22                      C: 0.6818                 T: 0.3182                
rs423285                         24         A: 0.8750                 G: 0.1250                             
rs595055                         18         A: 0.8889                 G: 0.1111                             
rs595961                         22         A: 0.9091                 G: 0.0909                             
rs603945                         18         A: 0.8889                 G: 0.1111                             
rs618675                         22                      C: 0.0455                 T: 0.9545                
rs645383                         18                      C: 0.8889    G: 0.1111                             
rs668092                         20                      C: 0.2500                 T: 0.7500                
rs716926                         18                      C: 0.1111                 T: 0.8889                
rs912537                         24                      C: 0.3333                 T: 0.6667      


Total stands as the total number of genotypes available in the Genotypes Table for a given SNP.

- Batch mode.

This is a fundamental time-saving feature. Selecting one of the fields in the Samples or SNP table, SNPator will run this analysis as many times as different values are in that fields, using each time only those samples or SNPs that have each of the values. For instance, if you have defined your samples in the "sex" field as "M" or "W", selecting "sex" as the attribute of the Sample batch mode will result in having two runs of the analysis, taking separately men and women.

If you select at the same time sample and SNP batch fields, you are going to obtain as many runs of the analysis as all possible combinations of the values of samples and SNPs in the fields you selected.