Genotype Frequencies
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A Report with genotype frequencies sorted by SNP can be obtained by means of this option. The Report is sent to the User Results section.

Time: 18 : 39 : 16
Date: 16 / 08 / 2005
User: advanced

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Study: sample 1                        
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SNP Code                         Total      Genotypes 
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rs1342476                        11         CC: 0.1818  CT: 0.6364  TT: 0.1818 
rs1886340                        11         CC: 0.4545  CT: 0.4545  TT: 0.0909 
rs1998626                        8          CC: 0.0000  CG: 0.7500  GG: 0.2500 
rs2104604                        12         GG: 1.0000 
rs242051                         10         CC: 0.8000  CG: 0.2000  GG: 0.0000 
rs272814                         11         GG: 0.9091  GT: 0.0909  TT: 0.0000 
rs274133                         11         CC: 0.0909  CT: 0.2727  TT: 0.6364 
rs274735                         9          AA: 0.7778  AG: 0.2222  GG: 0.0000 
rs414909                         11         CC: 0.4545  CT: 0.4545  TT: 0.0909 
rs423285                         12         AA: 0.7500  AG: 0.2500  GG: 0.0000 
rs595055                         9          AA: 0.7778  AG: 0.2222  GG: 0.0000 
rs595961                         11         AA: 0.8182  AG: 0.1818  GG: 0.0000 
rs603945                         9          AA: 0.7778  AG: 0.2222  GG: 0.0000 
rs618675                         11         CC: 0.0000  CT: 0.0909  TT: 0.9091 
rs645383                         9          CC: 0.7778  CG: 0.2222  GG: 0.0000 
rs668092                         10         CC: 0.2000  CT: 0.1000  TT: 0.7000 
rs716926                         9          CC: 0.0000  CT: 0.2222  TT: 0.7778 
rs912537                         12         CC: 0.0833  CT: 0.5000  TT: 0.4167

Total stands as the total number of genotypes available in the Genotypes Table for a given SNP.

- Batch mode.

This is a fundamental time-saving feature. Selecting one of the fields in the Samples or SNP table, SNPator will run this analysis as many times as different values are in that fields, using each time only those samples or SNPs that have each of the values. For instance, if you have defined your samples in the "sex" field as "M" or "W", selecting "sex" as the attribute of the Sample batch mode will result in having two runs of the analysis, taking separately men and women.

If you select at the same time sample and SNP batch fields, you are going to obtain as many runs of the analysis as all possible combinations of the values of samples and SNPs in the fields you selected.